|Title||Standardizing the Nomenclature for Clonal Lineages of the Sudden Oak Death Pathogen, Phytophthora ramorum|
|Publication Type||Journal Article|
|Authors||Grünwald, NJ, Goss, EM, Ivors, K, Garbelotto, M, Martin, FN, Prospero, S, Hansen, E, Bonants, PJM, Hamelin, RC, Chastagner, G, Werres, S, Rizzo, DM, Abad, G, Beales, P, Bilodeau, GJ, Blomquist, CL, Brasier, C, Briere, SC, Chandelier, A, Davidson, JM, Denman, S, Elliott, M, Frankel, SJ, Goheen, EM, de Gruyter, H, Heungens, K, James, D, Kanaskie, A, McWilliams, MG, in 't Veld, WM, Moralejo, E, Osterbauer, NK, Palm, ME, Parke, JL, Sierra, AMP, Shamoun, SF, Shishkoff, N, Tooley, PW, Vettraino, AM, Webber, J, Widmer, TL|
|california, central mexico, DNA polymorphisms, european populations, exotic pathogen, forensics, genotypic diversity, in-vitro, infestans, molecular ecology, north-american, phylogeography, population genetics, toluca valley, united-states|
Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e. g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.
Submitted by grunwaln on Thu, 2012-12-13 14:20