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Publications: Journal articles


Foster, Zachary SL, Thomas J Sharpton, and Niklaus J Grünwald. Metacoder: An R Package For Visualization And Manipulation Of Community Taxonomic Diversity Data. Plos Computational Biology 13 (2017): 1-15. doi:10.1371/journal.pcbi.1005404.
Paradis, Emmanuel , Thierry Gosselin, Niklaus J Grünwald, Thibaut Jombart, Stéphanie Manel, and Hilmar Lapp. Towards An Integrated Ecosystem Of R Packages For The Analysis Of Population Genetic Data. Molecular Ecology Resources 17 (2017): 1–4.
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Kamvar, Zhian N, Margarita M López-Uribe, Simone Coughlan, Niklaus J Grünwald, Hilmar Lapp, and Stéphanie Manel. Developing Educational Resources For Population Genetics In R: An Open And Collaborative Approach. Molecular Ecology Resources 17 (2017): 120–128.
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Knaus, Brian J, and Niklaus J Grünwald. Vcfr: A Package To Manipulate And Visualize Variant Call Format Data In R. Molecular Ecology Resources 17 (2017): 44–53.
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Foster, Zachary SL, Thomas Sharpton, and Niklaus J Grünwald. Metacoder: An R Package For Manipulation And Heat Tree Visualization Of Community Taxonomic Data From Metabarcoding. Biorxiv (2016): 071019.
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Hansen, Zachariah R, Brian J Knaus, Javier F Tabima, Caroline M Press, Howard S Judelson, Niklaus J Grünwald, and Christine D Smart. Snp-Based Differentiation Of Phytophthora Infestans Clonal Lineages Using Locked Nucleic Acid Probes And High-Resolution Melt Analysis. Plant Disease 100 (2016): 1297–1306.
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Hansen, Zachariah R, Kathryne L Everts, William E Fry, Amanda J Gevens, Niklaus J Grünwald, Beth K Gugino, Dennis A Johnson, et al.. Genetic Variation Within Clonal Lineages Of Phytophthora Infestans Revealed Through Genotyping-By-Sequencing, And Implications For Late Blight Epidemiology. Plos One 11 (2016): 1-22. doi:10.1371/journal.pone.0165690.
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Biasi, Antonio , Frank N Martin, Santa O Cacciola, Gaetano Magnano di San Lio, Niklaus J Grünwald, and Leonardo Schena. Genetic Analysis Of Phytophthora Nicotianae Populations From Different Hosts Using Microsatellite Markers. Phytopathology 06 (2016): 1006-1014.
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Davis, Edward W, Alexandra J Weisberg, Javier F Tabima, Niklaus J Grünwald, and Jeff H Chang. Gall-Id: Tools For Genotyping Gall-Causing Phytopathogenic Bacteria. Peerj 4 (2016): e2222. doi:10.7717/peerj.2222.
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